Unipro UGENE: free genome analysis suite
ShadowMaster | Apr 08, 2010 | Comments 0
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.
Main features:
- Multiple sequence alignment using MUSCLE 3,4 and KAlign;
- HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
- PCR Primers design using Primer 3;
- Protein secondary structure prediction using GOR IV and PSIPRED;
- Phylogenetic analysis with Phylip;
- Search for restriction enzymes and integration with REBASE;
- Extremely fast repeat finder;
- Search for transcription factor binding sites using SITECON;
- Protein back translation;
- ORF finder;
- Complete Smith-Waterman algorithm implementation.
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