Unipro UGENE: free genome analysis suite

| April 8, 2010

UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install.

Main features:

  • Multiple sequence alignment using MUSCLE 3,4 and KAlign;
  • HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
  • PCR Primers design using Primer 3;
  • Protein secondary structure prediction using GOR IV and PSIPRED;
  • Phylogenetic analysis with Phylip;
  • Search for restriction enzymes and integration with REBASE;
  • Extremely fast repeat finder;
  • Search for transcription factor binding sites using SITECON;
  • Protein back translation;
  • ORF finder;
  • Complete Smith-Waterman algorithm implementation.

Download UGENE

Category: Utilities